HMSBEAGLE  1.0.0
Public Member Functions | Protected Attributes
beagle::cpu::EigenDecomposition Class Reference

List of all members.

Public Member Functions

 EigenDecomposition (int decompositionCount, int stateCount, int categoryCount, long flags)
virtual void setEigenDecomposition (int eigenIndex, const double *inEigenVectors, const double *inInverseEigenVectors, const double *inEigenValues)=0
virtual void updateTransitionMatrices (int eigenIndex, const int *probabilityIndices, const int *firstDerivativeIndices, const int *secondDerivativeIndices, const double *edgeLengths, const double *categoryRates, REALTYPE **transitionMatrices, int count)=0

Protected Attributes

REALTYPE ** gEigenValues
int kStateCount
int kEigenDecompCount
int kCategoryCount
long kFlags
REALTYPE * matrixTmp
REALTYPE * firstDerivTmp
REALTYPE * secondDerivTmp

The documentation for this class was generated from the following file: